|本期目录/Table of Contents|

[1]扈利红,邱宝晨,辛灵彪,等.长链非编码RNA(AC073934.6)慢病毒质粒构建及其对HEY和HeLa细胞系SND1表达的影响[J].天津医科大学学报,2020,26(06):505-509.
 HU Li-hong,QIU Bao-chen,XIN Ling-biao,et al.Construction of lncRNA(AC073934.6) lentiviral plasmid and its effects on SND1 expression in HEY and HeLa cell lines[J].Journal of Tianjin Medical University,2020,26(06):505-509.
点击复制

长链非编码RNA(AC073934.6)慢病毒质粒构建及其对HEY和HeLa细胞系SND1表达的影响(PDF)
分享到:

《天津医科大学学报》[ISSN:1006-8147/CN:12-1259/R]

卷:
26卷
期数:
2020年06期
页码:
505-509
栏目:
基础医学
出版日期:
2020-11-20

文章信息/Info

Title:
Construction of lncRNA(AC073934.6) lentiviral plasmid and its effects on SND1 expression in HEY and HeLa cell lines
作者:
扈利红邱宝晨辛灵彪张纬
天津医科大学基础医学院生物化学与分子生物学系,天津300070
Author(s):
HU Li-hong QIU Bao-chen XIN Ling-biao ZHANG Wei
Department of Medical Biochemistry and Molecular Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China
关键词:
lncRNA质粒构建同源重组SND1
Keywords:
lncRNA plasmid construction homologous recombination SND1
分类号:
Q784
DOI:
-
文献标志码:
A
摘要:
目的:构建长链非编码RNA AC073934.6(lncRNA-AC)的慢病毒质粒,在HEY和HeLa细胞中稳定表达,并观察其对邻近基因SND1表达的影响。方法:提取基因组DNA,扩增出lncRNA-AC外显子1(F1R1)和外显子2(F2R2),化学合成外显子3(F3R3)。利用重叠延伸PCR获得上述3个DNA片段的连接产物(F1R3);通过同源重组的方法将F1R3和慢病毒载体pLVX-IRES-Puro连接起来,构建pLVX-lncRNA-AC重组质粒。用慢病毒包装的方法获得过表达lncRNA-AC的慢病毒,随后感染HEY和HeLa细胞系,PCR检测lncRNA-AC的转录,通过实时荧光定量PCR和Western印迹检测SND1表达。结果:通过菌液PCR和测序验证了重组质粒pLVX-lncRNA-AC构建成功;利用慢病毒感染细胞后,通过PCR检测过表达lncRNA-AC的稳定株构建成功;在稳定株中通过实时荧光定量PCR检测SND1的mRNA水平,在HEY细胞系中,WT和过表达lncRNA-AC后SND1的mRNA相对表达量分别为1.00±0.14和1.24±0.19,两者比较,差异无统计学意义(t=1.761,P=0.07);在HeLa细胞系中,两者的表达量分别为1.02±0.09和0.83±0.13,差异无统计学意义(t=2.081,P=0.14),同时Western 印迹检测SND1的蛋白水平无明显差异。结论:在HEY和HeLa细胞系中过表达lncRNA-AC不影响SND1的表达。
Abstract:
Objective: To construct a lentiviral plasmid of long non-coding RNA AC073934.6(lncRNA-AC) stably expressed in HEY and HeLa cell lines, and observe its effects on the expression of SND1. Methods: LncRNA-AC exon 1(F1R1) and exon 2(F2R2) were amplified by using the extracted genomic DNA as template, and exon 3(F3R3) was chemically synthesized. The target product(F1R3) of lncRNA-AC was obtained by overlap extension PCR that ligated the above three DNA fragments. F1R3 and the lentiviral vector pLVX-IRES-Puro were ligated by homologous recombination to construct recombinant pLVX-lncRNA-AC plasmid. Virions, over-expressing lncRNA-AC,was obtained by lentivirus packaging, and subsequently infected with HEY and HeLa cell lines. PCR was used to test the transcription of lncRNA-AC. Real-time fluorescent quantitative PCR and Western blotting were used to detect the expression of SND1. Results: The recombinant plasmid pLVX-lncRNA-AC was successfully constructed by bacterial PCR and sequencing. Lentivirus was used to infect cells to construct a stable overexpressing lncRNA-AC strain which was tested by PCR. The mRNA level of SND1 was detected by real-time fluorescent quantitative PCR in stable strains. In the HEY cell line, the relative expression of SND1 mRNA in WT and overexpression of lncRNA-AC were 1.00±0.14 and 1.24±0.19, there was no statistical difference(t=1.761,P=0.07). In the HeLa cell line, the expression levels were 1.02±0.09 and 0.83±0.13, the difference was not statistically significant(t=2.081,P=0.14),and there was no significant difference in the protein level of SND1 detected by Western blotting. Conclusion: In HEY and HeLa cell lines, overexpression of lncRNA-AC can not affect the expression of SND1.

参考文献/References:

[1] Barangi S,Hayes A,Reiter R,et al. The therapeutic role of long non-coding RNAs in human diseases: a focus on the recent insights into autophagy[J]. Pharmacol Res,2019,142:22
[2] Wang K,Liu F,Zhou L,et al. The long noncoding RNA CHRF regulates cardiac hypertrophy by targeting miR-489[J]. Circ Res,2014, 114(9):1377
[3] Archer K,Broskova Z,Bayoumi A,et al. Long non-coding RNAs as master regulators in cardiovascular diseases[J]. Int J Mol Sci,2015, 16(10):23651
[4] Liang L,Zhang Z,Qin X,et al. Long noncoding RNA ZFAS1 promotes tumorigenesis through regulation of miR-150-5p/RAB9A in melanoma[J]. Melanoma Res,2019,29(6):569
[5] Cabianca D,Casa V,Gabellini D. A novel molecular mechanism in human genetic disease:a DNA repeat-derived lncRNA[J]. RNA Biol,2012,9(10):1211
[6] Azais H,Mordon S,Collinet P. Intraperitoneal photodynamic therapy for peritoneal metastasis of epithelial ovarian cancer. Limits and future prospects[J]. Gynecol Obstet Fertil Senol,2017,45(4): 249
[7] Su C,Zhang C,Tecle A,et al. Tudor staphylococcal nuclease(Tudor-SN),a novel regulator facilitating G1/S phase transition,acting as a co-activator of E2F-1 in cell cycle regulation[J]. J Biol Chem,2015,290(11):7208
[8] Yang J,Valineva T,Hong J,et al. Transcriptional co-activator protein p100 interacts with snRNP proteins and facilitates the assembly of the spliceosome[J]. Nucleic Acids Res,2007,35(13):4485
[9] Cui X,Zhao C,Yao X,et al. SND1 acts as an anti-apoptotic factor via regulating the expression of lncRNA UCA1 in hepatocellular carcinoma[J]. RNA Biol,2018,15(10):1364
[10] Gutierrez E,Denisenko T,Zhivotovsky B,et al.Tudor staphylococcal nuclease: biochemistry and functions[J]. Cell Death Differ,2016,23(11):1739
[11] Xin L,Zhao R,Lei J,et al. SND1 acts upstream of SLUG to regulate the epithelial-mesenchymal transition(EMT) in SKOV3 cells[J]. FASEB J,2019,33(3):3795
[12] 哈传博,赵然,雷静,等.同义突变SND1慢病毒质粒的构建及回复表达[J]. 生物技术,2018,28(4):329
[13] Heckman K,Pease L. Gene splicing and mutagenesis by PCR-driven overlap extension[J]. Nat Protoc, 2007,2(4):924
[14] 马凯,胡红霞,于婧,等.双酶切和同源重组方法构建pMIR-reporter载体的比较[J]. 中国病原生物学杂志, 2015,10(6):495
[15] 邝翡婷,袁定阳,李莉,等. 一种载体构建的新方法:重组融合PCR法[J]. 基因组学与应用生物学, 2012,31 (6):634

相似文献/References:

[1]牛 健,于晓旭,李 雪,等.重组 CARDs TX 融合蛋白的表达纯化与复性[J].天津医科大学学报,2014,20(03):184.
 NIU Jian,YU Xiao-xu,LI Xue,et al.Expression, purification and renaturation of recombinant CARDs TX fusion protein[J].Journal of Tianjin Medical University,2014,20(06):184.
[2]李昱剑,阚璇.哮喘中miRNA、lncRNA、circRNA、转录因子和靶基因的调控网络[J].天津医科大学学报,2023,29(03):235.
 LI Yu-jian,KAN Xuan.Regulatory networks of miRNA,lncRNA,circRNA,transcription factors and target genes in asthma[J].Journal of Tianjin Medical University,2023,29(06):235.
[3]董玉梅,杜雪.早发性卵巢功能不全的lncRNA-miRNA-mRNA网络的构建和生物信息学分析[J].天津医科大学学报,2024,30(05):422.[doi:10.20135/j.issn.1006-8147.2024.05.0422]
 DONG Yumei,DU Xue.Construction and bioinformatics analysis of lncRNA-miRNA-mRNA network in premature ovarian insufficiency[J].Journal of Tianjin Medical University,2024,30(06):422.[doi:10.20135/j.issn.1006-8147.2024.05.0422]

备注/Memo

备注/Memo:
文章编号 1006-8147(2020)06-0505-05
基金项目 国家自然科学基金青年项目(81802588);天津市自然科学基金青年项目(17JCQNJC12600);天津市高等 教育委员会科技发展基金一般项目(2016YD18)
作者简介 扈利红(1996-),女,硕士在读,研究方向:SND1在海马体中的作用;通信作者:张纬,E- mail:zhangjingyi98@163.com。
更新日期/Last Update: 2020-11-20